Thank you for using SEGUL! 🙏🏻

segul is an ultrafast and memory efficient phylogenomic data manipulation and summary statistics calculation.

Why SEGUL?

1. Fast and memory efficient. It can process thousands of loci on a computer with limited RAM.
2. Repeatable and reproducible. It supports reproducible research by providing a complete log of the analysis. The CLI and GUI version combined runs on macOS, Windows, Linux, Android, iPadOS, and iOS.
3. Easy to use. It has a simple command line interface and a GUI app (in alpha version).
4. API support.

Big changes in the version 0.19.0 💪🏼

• New command structure. Check quick start instruction to see the most up to date commands. We are working on updating the documentation throughout the website.
• New command to calculate summary statistics for raw reads and contigs.
• Input dir -d or --dir now can infer input format based on the file extension. No need to specify the input format anymore.

SEGUL GUI (SEGUI) is available to test! 🎉🎉🎉

It brings nearly similar speed and memory efficiency as the command line version, but with the convenience of GUI. Current version of SEGUI supports macOS, Windows, Android, iPadOS, and iOS. To the test the app, checkout the installation instruction under the GUI Usage section. To see development progress, checkout the GitHub repository.